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  5. LOC_Os12g05200.1

LOC_Os12g05200.1


Description : AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana (sp|q8vyj2|ahl1_arath : 160.0)


Gene families : OG0000405 (Archaeplastida) Phylogenetic Tree(s): OG0000405_tree ,
OG_05_0000251 (LandPlants) Phylogenetic Tree(s): OG_05_0000251_tree ,
OG_06_0000180 (SeedPlants) Phylogenetic Tree(s): OG_06_0000180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g05200.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AT2G45850 No alias AT hook motif DNA-binding family protein 0.04 Archaeplastida
AT4G22770 No alias AT hook motif DNA-binding family protein 0.04 Archaeplastida
AT4G25320 No alias AT hook motif DNA-binding family protein 0.03 Archaeplastida
AT5G62260 No alias AT hook motif DNA-binding family protein 0.04 Archaeplastida
GSVIVT01013426001 No alias AT-hook motif nuclear-localized protein 10... 0.04 Archaeplastida
MA_10434727g0010 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c3_27790V3.1 No alias AT hook motif DNA-binding family protein 0.03 Archaeplastida
Solyc01g091370.4.1 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc08g006950.4.1 No alias AT-hook motif nuclear-localized protein 10... 0.05 Archaeplastida
Zm00001e002444_P001 No alias AT-hook motif nuclear-localized protein 10... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005175 PPC_dom 48 161
No external refs found!