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  5. LOC_Os12g06030.1

LOC_Os12g06030.1


Description : Probable F-box protein At2g36090 OS=Arabidopsis thaliana (sp|q9sih5|fb322_arath : 111.0)


Gene families : OG0001951 (Archaeplastida) Phylogenetic Tree(s): OG0001951_tree ,
OG_05_0001385 (LandPlants) Phylogenetic Tree(s): OG_05_0001385_tree ,
OG_06_0004269 (SeedPlants) Phylogenetic Tree(s): OG_06_0004269_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g06030.1
Cluster HCCA: Cluster_355

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00031290 evm_27.TU.AmTr_v1... F-box protein At2g27310 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT2G27310 No alias F-box family protein 0.03 Archaeplastida
GSVIVT01011119001 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_22367 No alias SLY-type gibberellin signal transducer. component F-box... 0.01 Archaeplastida
LOC_Os03g24230.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g33820.1 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os11g05660.1 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Mp5g06150.1 No alias SLY-type gibberellin signal transducer. component F-box... 0.01 Archaeplastida
Pp3c23_3650V3.1 No alias F-box family protein 0.02 Archaeplastida
Solyc10g083230.1.1 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.1 Archaeplastida
Zm00001e014737_P001 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e040837_P001 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 25 71
No external refs found!