Description : transcription factor (RAV/NGATHA)
Gene families : OG0000363 (Archaeplastida) Phylogenetic Tree(s): OG0000363_tree ,
OG_05_0000191 (LandPlants) Phylogenetic Tree(s): OG_05_0000191_tree ,
OG_06_0000986 (SeedPlants) Phylogenetic Tree(s): OG_06_0000986_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os12g06080.1 | |
Cluster | HCCA: Cluster_235 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00018p00040300 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.07 | Archaeplastida | |
AT1G13260 | EDF4, RAV1 | related to ABI3/VP1 1 | 0.03 | Archaeplastida | |
AT3G61970 | NGA2 | AP2/B3-like transcriptional factor family protein | 0.03 | Archaeplastida | |
Gb_18035 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.03 | Archaeplastida | |
LOC_Os01g04750.1 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.05 | Archaeplastida | |
LOC_Os05g47650.1 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.04 | Archaeplastida | |
LOC_Os08g06120.1 | No alias | transcription factor (RAV/NGATHA) | 0.04 | Archaeplastida | |
LOC_Os10g39190.1 | No alias | transcription factor (RAV/NGATHA) | 0.04 | Archaeplastida | |
MA_10428163g0010 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.04 | Archaeplastida | |
MA_10436315g0010 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | Archaeplastida | |
MA_116574g0010 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.04 | Archaeplastida | |
MA_865117g0010 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.03 | Archaeplastida | |
Pp3c1_16700V3.1 | No alias | related to ABI3/VP1 1 | 0.03 | Archaeplastida | |
Pp3c2_23660V3.1 | No alias | AP2/B3 transcription factor family protein | 0.03 | Archaeplastida | |
Solyc05g004000.1.1 | No alias | transcription factor (RAV/NGATHA) | 0.02 | Archaeplastida | |
Solyc08g013690.1.1 | No alias | transcription factor (RAV/NGATHA) | 0.02 | Archaeplastida | |
Solyc12g098460.2.1 | No alias | AP2/ERF and B3 domain-containing transcription factor... | 0.05 | Archaeplastida | |
Zm00001e015451_P001 | No alias | transcription factor (RAV/NGATHA) | 0.04 | Archaeplastida | |
Zm00001e024165_P001 | No alias | transcription factor (RAV/NGATHA) | 0.04 | Archaeplastida | |
Zm00001e040214_P001 | No alias | transcription factor (RAV/NGATHA) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Neighborhood |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
MF | GO:0008146 | sulfotransferase activity | IEP | Neighborhood |
BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
BP | GO:0009725 | response to hormone | IEP | Neighborhood |
BP | GO:0009733 | response to auxin | IEP | Neighborhood |
BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Neighborhood |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Neighborhood |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Neighborhood |
MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Neighborhood |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Neighborhood |
MF | GO:0050662 | coenzyme binding | IEP | Neighborhood |
MF | GO:0051213 | dioxygenase activity | IEP | Neighborhood |
BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003340 | B3_DNA-bd | 36 | 140 |
No external refs found! |