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  5. LOC_Os12g06230.1

LOC_Os12g06230.1


Description : no hits & (original description: none)


Gene families : OG0000538 (Archaeplastida) Phylogenetic Tree(s): OG0000538_tree ,
OG_05_0000814 (LandPlants) Phylogenetic Tree(s): OG_05_0000814_tree ,
OG_06_0000441 (SeedPlants) Phylogenetic Tree(s): OG_06_0000441_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g06230.1
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g07990.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g31560.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g45750.1 No alias Replication protein A 70 kDa DNA-binding subunit B... 0.03 Archaeplastida
LOC_Os10g01770.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g12174.1 No alias Replication protein A 70 kDa DNA-binding subunit B... 0.02 Archaeplastida
LOC_Os11g38300.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g44830.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g35400.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA Interproscan
MF GO:0003678 DNA helicase activity IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010285 DNA_helicase_pif1-like 1110 1370
IPR031657 REPA_OB_2 1548 1612
IPR025476 Helitron_helicase-like 518 617
IPR025476 Helitron_helicase-like 619 648
No external refs found!