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  5. LOC_Os12g06335.1

LOC_Os12g06335.1


Description : Transcription factor LHW OS=Arabidopsis thaliana (sp|q9xin0|lhw_arath : 299.0)


Gene families : OG0001327 (Archaeplastida) Phylogenetic Tree(s): OG0001327_tree ,
OG_05_0000903 (LandPlants) Phylogenetic Tree(s): OG_05_0000903_tree ,
OG_06_0001711 (SeedPlants) Phylogenetic Tree(s): OG_06_0001711_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g06335.1
Cluster HCCA: Cluster_312

Target Alias Description ECC score Gene Family Method Actions
AT1G06150 EMB1444 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
GSVIVT01037572001 No alias Transcription factor LHW OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc09g066280.4.1 No alias Transcription factor EMB1444 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e009089_P003 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e015411_P002 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e024625_P002 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e039416_P001 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 6 154
No external refs found!