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  5. LOC_Os12g06690.1

LOC_Os12g06690.1


Description : no hits & (original description: none)


Gene families : OG0000596 (Archaeplastida) Phylogenetic Tree(s): OG0000596_tree ,
OG_05_0000323 (LandPlants) Phylogenetic Tree(s): OG_05_0000323_tree ,
OG_06_0000139 (SeedPlants) Phylogenetic Tree(s): OG_06_0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g06690.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g25800.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g32690.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g07680.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g11290.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g11610.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g29200.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g13910.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g28930.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g11040.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g28250.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g12080.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g01870.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g16470.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g17390.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g14840.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g19510.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g27940.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g28230.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g29890.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g10000.1 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!