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  5. LOC_Os12g07640.1

LOC_Os12g07640.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g07640.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00010p00264600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00024p00225650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00032p00057800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00032p00221670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00133p00071910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.02 Archaeplastida
AT1G74650 ATMYB31, MYB31, ATY13 myb domain protein 31 0.05 Archaeplastida
AT2G13960 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G31180 ATMYB14, MYB14, MYB14AT myb domain protein 14 0.03 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.04 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.02 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.02 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.02 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.03 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.02 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.02 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.02 Archaeplastida
AT5G16600 MYB43, AtMYB43 myb domain protein 43 0.03 Archaeplastida
AT5G49620 AtMYB78, MYB78 myb domain protein 78 0.04 Archaeplastida
AT5G56110 MYB103,... myb domain protein 103 0.02 Archaeplastida
AT5G62320 ATMYB99, ATMYBCU15, MYB99 myb domain protein 99 0.02 Archaeplastida
GSVIVT01004317001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01018234001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01023531001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029904001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01030434001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01033648001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_03994 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_22885 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_25814 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_34388 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_39081 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_40065 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_40629 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g28280.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g36460.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g50720.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g51260.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g42850.2 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g25550.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g38740.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g48870.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g33660.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g36250.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10157944g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10427849g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10431212g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_124887g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_128244g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_14061g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_1589g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_223201g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_2797g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_308669g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_316475g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_322432g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_499305g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_69407g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_8147g0020 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp8g11870.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c17_19947V3.1 No alias myb domain protein 88 0.03 Archaeplastida
Pp3c23_7530V3.1 No alias myb domain protein 77 0.02 Archaeplastida
Pp3c4_13790V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c9_10290V3.1 No alias myb domain protein 55 0.03 Archaeplastida
Pp3c9_24170V3.1 No alias myb domain protein 33 0.02 Archaeplastida
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo84608 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc01g102340.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g113530.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g007870.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g005310.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g005330.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g053610.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc06g069850.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g005870.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc10g005760.3.1 No alias transcription factor (MYB). transcriptional key... 0.02 Archaeplastida
Solyc10g055410.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e008489_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009831_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e012497_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e012960_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e013452_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015125_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016583_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e018471_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e027531_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028653_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e029600_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e029601_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e032347_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e038964_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e040265_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e041553_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004126 cytidine deaminase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Neighborhood
BP GO:0006216 cytidine catabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009164 nucleoside catabolic process IEP Neighborhood
BP GO:0009972 cytidine deamination IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Neighborhood
BP GO:0042454 ribonucleoside catabolic process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046087 cytidine metabolic process IEP Neighborhood
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Neighborhood
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901658 glycosyl compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!