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  5. LOC_Os12g08530.1

LOC_Os12g08530.1


Description : no hits & (original description: none)


Gene families : OG0004782 (Archaeplastida) Phylogenetic Tree(s): OG0004782_tree ,
OG_05_0003307 (LandPlants) Phylogenetic Tree(s): OG_05_0003307_tree ,
OG_06_0001901 (SeedPlants) Phylogenetic Tree(s): OG_06_0001901_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g08530.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g41640.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os04g17200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g18960.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os06g13620.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR010666 Znf_GRF 33 76
No external refs found!