Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.203
Description : Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana
Gene families : OG0000152 (Archaeplastida) Phylogenetic Tree(s): OG0000152_tree ,
OG_05_0002310 (LandPlants) Phylogenetic Tree(s): OG_05_0002310_tree ,
OG_06_0001345 (SeedPlants) Phylogenetic Tree(s): OG_06_0001345_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00011p00263440 | |
Cluster | HCCA: Cluster_231 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00033p00156340 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g80550,... | 0.03 | Archaeplastida | |
AMTR_s00078p00045650 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g52640,... | 0.04 | Archaeplastida | |
AMTR_s00105p00044870 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g71060,... | 0.04 | Archaeplastida | |
AMTR_s00119p00029960 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g15010,... | 0.04 | Archaeplastida | |
AT1G52640 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Archaeplastida | |
AT1G80880 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT3G15200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
GSVIVT01008815001 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.02 | Archaeplastida | |
GSVIVT01015982001 | No alias | Pentatricopeptide repeat-containing protein At1g80880,... | 0.02 | Archaeplastida | |
GSVIVT01018015001 | No alias | Pentatricopeptide repeat-containing protein At3g22670,... | 0.02 | Archaeplastida | |
GSVIVT01026463001 | No alias | Pentatricopeptide repeat-containing protein At2g13420,... | 0.04 | Archaeplastida | |
GSVIVT01027388001 | No alias | Pentatricopeptide repeat-containing protein At1g80550,... | 0.02 | Archaeplastida | |
Gb_11871 | No alias | Pentatricopeptide repeat-containing protein At3g49730... | 0.04 | Archaeplastida | |
Gb_12501 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.03 | Archaeplastida | |
Gb_13617 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.03 | Archaeplastida | |
Gb_19758 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
LOC_Os01g05860.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
LOC_Os01g60010.1 | No alias | Pentatricopeptide repeat-containing protein At5g15010,... | 0.05 | Archaeplastida | |
LOC_Os03g51840.1 | No alias | Pentatricopeptide repeat-containing protein At3g49730... | 0.02 | Archaeplastida | |
LOC_Os04g55090.1 | No alias | Pentatricopeptide repeat-containing protein At1g80550,... | 0.03 | Archaeplastida | |
LOC_Os08g28180.1 | No alias | Pentatricopeptide repeat-containing protein At2g13420,... | 0.02 | Archaeplastida | |
LOC_Os09g37070.1 | No alias | Pentatricopeptide repeat-containing protein At1g20300,... | 0.03 | Archaeplastida | |
MA_355286g0010 | No alias | Pentatricopeptide repeat-containing protein At5g15010,... | 0.02 | Archaeplastida | |
MA_6218g0010 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.04 | Archaeplastida | |
MA_929381g0010 | No alias | OTP43 mitochondrial RNA splicing factor | 0.02 | Archaeplastida | |
MA_933431g0010 | No alias | Pentatricopeptide repeat-containing protein At1g20300,... | 0.02 | Archaeplastida | |
MA_9740107g0010 | No alias | Pentatricopeptide repeat-containing protein At5g15010,... | 0.02 | Archaeplastida | |
Solyc01g097130.4.1 | No alias | Pentatricopeptide repeat-containing protein At3g62470,... | 0.02 | Archaeplastida | |
Solyc03g116540.1.1 | No alias | Pentatricopeptide repeat-containing protein At1g52640,... | 0.04 | Archaeplastida | |
Solyc04g081950.4.1 | No alias | Pentatricopeptide repeat-containing protein At1g20300,... | 0.03 | Archaeplastida | |
Zm00001e005553_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Zm00001e010274_P001 | No alias | Pentatricopeptide repeat-containing protein At1g20300,... | 0.03 | Archaeplastida | |
Zm00001e015617_P001 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.03 | Archaeplastida | |
Zm00001e036197_P001 | No alias | Pentatricopeptide repeat-containing protein At1g71060,... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000726 | non-recombinational repair | IEP | Neighborhood |
MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
MF | GO:0004835 | tubulin-tyrosine ligase activity | IEP | Neighborhood |
CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
BP | GO:0006302 | double-strand break repair | IEP | Neighborhood |
BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Neighborhood |
MF | GO:0008373 | sialyltransferase activity | IEP | Neighborhood |
MF | GO:0008409 | 5'-3' exonuclease activity | IEP | Neighborhood |
MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Neighborhood |
MF | GO:0043531 | ADP binding | IEP | Neighborhood |
No external refs found! |