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  5. LOC_Os12g08770.1

LOC_Os12g08770.1


Description : component PsaN of PS-I complex


Gene families : OG0007954 (Archaeplastida) Phylogenetic Tree(s): OG0007954_tree ,
OG_05_0008815 (LandPlants) Phylogenetic Tree(s): OG_05_0008815_tree ,
OG_06_0008519 (SeedPlants) Phylogenetic Tree(s): OG_06_0008519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g08770.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00209p00025500 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.2 Archaeplastida
AT5G64040 PSAN photosystem I reaction center subunit PSI-N,... 0.21 Archaeplastida
Cre02.g082500 No alias Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.17 Archaeplastida
GSVIVT01026478001 No alias Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.04 Archaeplastida
Gb_30707 No alias component PsaN of PS-I complex 0.12 Archaeplastida
MA_348255g0010 No alias component PsaN of PS-I complex 0.15 Archaeplastida
Mp4g20410.1 No alias component PsaN of PS-I complex 0.2 Archaeplastida
Solyc08g013670.3.1 No alias component PsaN of PS-I complex 0.29 Archaeplastida
Zm00001e018392_P001 No alias component PsaN of PS-I complex 0.17 Archaeplastida
Zm00001e039588_P001 No alias component PsaN of PS-I complex 0.14 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0010242 oxygen evolving activity IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR008796 PSAN 25 149
No external refs found!