LOC_Os12g09710.1

Description : no description available(sp|p0do08|pikm2_orysj : 311.0)

Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0082206 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0071112 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g09710.1
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AT1G58400	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Archaeplastida
AT1G58410	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	Archaeplastida
AT1G58602	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.04	Archaeplastida
AT1G58848	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	Archaeplastida
AT1G59218	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	Archaeplastida
AT1G59620	CW9	Disease resistance protein (CC-NBS-LRR class) family	0.05	Archaeplastida
AT3G46710	No alias	NB-ARC domain-containing disease resistance protein	0.05	Archaeplastida
AT3G50950	ZAR1	HOPZ-ACTIVATED RESISTANCE 1	0.04	Archaeplastida
ChrUn.fgenesh.mRNA.29	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.05	Archaeplastida
GSVIVT01018564001	No alias	Putative disease resistance RPP13-like protein 3...	0.04	Archaeplastida
GSVIVT01024101001	No alias	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01026725001	No alias	Putative disease resistance protein At1g50180...	0.04	Archaeplastida
GSVIVT01026728001	No alias	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.05	Archaeplastida
GSVIVT01026745001	No alias	Putative disease resistance protein At1g50180...	0.03	Archaeplastida
GSVIVT01026750001	No alias	Disease resistance protein RPP8 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01032824001	No alias	Putative disease resistance protein At1g50180...	0.03	Archaeplastida
GSVIVT01032830001	No alias	Probable disease resistance RPP8-like protein 2...	0.06	Archaeplastida
Gb_37038	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Gb_37039	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os02g17304.1	No alias	no description available(sp\|q2r8l1\|rga5s_orysj : 379.0)	0.02	Archaeplastida
LOC_Os04g02860.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os04g14220.2	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os08g10260.1	No alias	no description available(sp\|q2r8l1\|rga5s_orysj : 447.0)	0.04	Archaeplastida
LOC_Os08g16070.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os09g09490.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os10g04674.2	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os11g11950.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os11g11990.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.09	Archaeplastida
LOC_Os11g12050.2	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os11g12340.2	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.05	Archaeplastida
MA_423032g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc01g086810.2.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc04g009690.2.1	No alias	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc04g026110.4.1	No alias	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc08g005440.3.1	No alias	RPM1 effector-triggered immunity CC-NLR-type effector receptor	0.03	Archaeplastida
Zm00001e024479_P001	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e039751_P001	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003993	acid phosphatase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006813	potassium ion transport	IEP	Neighborhood
BP	GO:0008037	cell recognition	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0008272	sulfate transport	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0008654	phospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Neighborhood
MF	GO:0016726	oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Neighborhood
BP	GO:0048544	recognition of pollen	IEP	Neighborhood
BP	GO:0050992	dimethylallyl diphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0050993	dimethylallyl diphosphate metabolic process	IEP	Neighborhood
MF	GO:0051745	4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0071804	cellular potassium ion transport	IEP	Neighborhood
BP	GO:0071805	potassium ion transmembrane transport	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	192	435

External Links

No external refs found!

LOC_Os12g09710.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation