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  5. LOC_Os12g09890.1

LOC_Os12g09890.1


Description : no hits & (original description: none)


Gene families : OG0000875 (Archaeplastida) Phylogenetic Tree(s): OG0000875_tree ,
OG_05_0000520 (LandPlants) Phylogenetic Tree(s): OG_05_0000520_tree ,
OG_06_0000249 (SeedPlants) Phylogenetic Tree(s): OG_06_0000249_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g09890.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g22140.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g24890.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g19240.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g21720.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g30390.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g36090.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g45810.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g03610.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g24680.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g14410.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g25170.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os06g15010.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g19510.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os08g16340.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os08g17730.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g17740.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g28760.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os09g01750.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g14770.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g16630.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g25630.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g15950.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g29630.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
InterPro domains Description Start Stop
IPR004252 Probable_transposase_24 243 383
No external refs found!