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  5. LOC_Os12g10930.1

LOC_Os12g10930.1


Description : Receptor-like protein 9DC3 OS=Solanum pimpinellifolium (sp|q5mr23|9dc3_solpi : 333.0)


Gene families : OG0001392 (Archaeplastida) Phylogenetic Tree(s): OG0001392_tree ,
OG_05_0000901 (LandPlants) Phylogenetic Tree(s): OG_05_0000901_tree ,
OG_06_0000755 (SeedPlants) Phylogenetic Tree(s): OG_06_0000755_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g10930.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030338001 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium 0.02 Archaeplastida
GSVIVT01030340001 No alias Receptor-like protein 19 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01030341001 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium 0.02 Archaeplastida
LOC_Os01g07280.1 No alias no description available(sp|q9svm3|rlp49_arath : 362.0) 0.06 Archaeplastida
Solyc09g005090.1.1 No alias Receptor-like protein 7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc10g076500.3.1 No alias Receptor like protein 26 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 268 325
IPR001611 Leu-rich_rpt 608 666
IPR001611 Leu-rich_rpt 120 142
IPR013210 LRR_N_plant-typ 48 90
No external refs found!