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  5. LOC_Os12g12730.1

LOC_Os12g12730.1


Description : Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica (sp|q2qvi1|cml28_orysj : 237.0)


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree ,
OG_06_0001071 (SeedPlants) Phylogenetic Tree(s): OG_06_0001071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g12730.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00127800 evm_27.TU.AmTr_v1... Calmodulin OS=Solanum lycopersicum 0.02 Archaeplastida
AMTR_s00126p00123680 evm_27.TU.AmTr_v1... Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G24620 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
AT4G03290 No alias EF hand calcium-binding protein family 0.03 Archaeplastida
AT4G12860 UNE14 EF hand calcium-binding protein family 0.03 Archaeplastida
Mp2g14930.1 No alias Probable calcium-binding protein CML23 OS=Arabidopsis... 0.02 Archaeplastida
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp6g20450.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 Archaeplastida
Pp3c24_2030V3.1 No alias calmodulin 5 0.02 Archaeplastida
Pp3c25_10220V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c5_10970V3.1 No alias calmodulin like 23 0.02 Archaeplastida
Solyc03g118810.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.02 Archaeplastida
Solyc06g068960.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.02 Archaeplastida
Zm00001e010984_P001 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.04 Archaeplastida
Zm00001e011787_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e024051_P001 No alias Putative calmodulin-like protein 2 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e035870_P001 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 98 163
IPR002048 EF_hand_dom 5 62
No external refs found!