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  5. LOC_Os12g12810.1

LOC_Os12g12810.1


Description : Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana (sp|q6aww5|y5262_arath : 110.0)


Gene families : OG0001293 (Archaeplastida) Phylogenetic Tree(s): OG0001293_tree ,
OG_05_0000815 (LandPlants) Phylogenetic Tree(s): OG_05_0000815_tree ,
OG_06_0003960 (SeedPlants) Phylogenetic Tree(s): OG_06_0003960_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g12810.1
Cluster HCCA: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g30440.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g12350.1 No alias no hits & (original description: none) 0.2 Archaeplastida
LOC_Os09g16060.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g16180.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os09g17520.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 243 324
IPR020683 Ankyrin_rpt-contain_dom 410 506
IPR002110 Ankyrin_rpt 522 542
No external refs found!