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  5. LOC_Os12g12970.1

LOC_Os12g12970.1


Description : transcription factor (RKD)


Gene families : OG0000222 (Archaeplastida) Phylogenetic Tree(s): OG0000222_tree ,
OG_05_0000384 (LandPlants) Phylogenetic Tree(s): OG_05_0000384_tree ,
OG_06_0000831 (SeedPlants) Phylogenetic Tree(s): OG_06_0000831_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g12970.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT5G16100 No alias unknown protein; Has 30201 Blast hits to 17322 proteins... 0.03 Archaeplastida
LOC_Os04g26080.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e017870_P001 No alias transcription factor (RKD) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 369 416
No external refs found!