LOC_Os12g13720.1


Description : subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0001898 (LandPlants) Phylogenetic Tree(s): OG_05_0001898_tree ,
OG_06_0001369 (SeedPlants) Phylogenetic Tree(s): OG_06_0001369_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g13720.1
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00225530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00068p00162220 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00069p00191700 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00122p00120860 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Cre04.g224500 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Gb_34645 No alias subfamily ABCG transporter 0.02 Archaeplastida
Gb_37007 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os02g21340.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os08g43120.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10425791g0020 No alias subfamily ABCG transporter 0.01 Archaeplastida
MA_10426781g0010 No alias subfamily ABCG transporter 0.01 Archaeplastida
MA_10427561g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_10427683g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_10437002g0020 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10437197g0020 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_160238g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_184352g0010 No alias ABC transporter G family member 36 OS=Oryza sativa... 0.04 Archaeplastida
MA_18770g0010 No alias subfamily ABCG transporter 0.04 Archaeplastida
MA_598099g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_911577g0010 No alias ABC transporter G family member 36 OS=Arabidopsis... 0.01 Archaeplastida
Mp1g24380.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp1g25350.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp2g07030.1 No alias subfamily ABCG transporter 0.01 Archaeplastida
Mp2g21800.1 No alias subfamily ABCG transporter 0.01 Archaeplastida
Mp4g05490.1 No alias subfamily ABCG transporter 0.01 Archaeplastida
Pp3c5_3240V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Archaeplastida
Smo122902 No alias ABC transporter G family member 34 OS=Arabidopsis thaliana 0.01 Archaeplastida
Smo424638 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Smo441717 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Solyc01g101070.3.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc05g055330.3.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc08g067610.3.1 No alias subfamily ABCG transporter 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 652 804
IPR013525 ABC_2_trans 949 1165
IPR013525 ABC_2_trans 313 524
IPR013581 PDR_assoc 531 581
No external refs found!