LOC_Os12g16690.1


Description : no hits & (original description: none)


Gene families : OG0002939 (Archaeplastida) Phylogenetic Tree(s): OG0002939_tree ,
OG_05_0003657 (LandPlants) Phylogenetic Tree(s): OG_05_0003657_tree ,
OG_06_0003134 (SeedPlants) Phylogenetic Tree(s): OG_06_0003134_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g16690.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00060930 evm_27.TU.AmTr_v1... No description available 0.17 Archaeplastida
Cre01.g007350 No alias No description available 0.06 Archaeplastida
MA_26177g0010 No alias no hits & (original description: none) 0.19 Archaeplastida
Mp3g05360.1 No alias no hits & (original description: none) 0.12 Archaeplastida
Pp3c9_11850V3.1 No alias zinc finger (C3HC4-type RING finger) family protein 0.1 Archaeplastida
Solyc02g067970.4.1 No alias no hits & (original description: none) 0.24 Archaeplastida
Solyc02g093760.4.1 No alias no hits & (original description: none) 0.26 Archaeplastida
Zm00001e011008_P001 No alias no hits & (original description: none) 0.24 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 164 202
No external refs found!