Description : component RPS3a of SSU proteome
Gene families : OG0001983 (Archaeplastida) Phylogenetic Tree(s): OG0001983_tree ,
OG_05_0001683 (LandPlants) Phylogenetic Tree(s): OG_05_0001683_tree ,
OG_06_0002405 (SeedPlants) Phylogenetic Tree(s): OG_06_0002405_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os12g21798.1 | |
Cluster | HCCA: Cluster_140 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00271660 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | Archaeplastida | |
AMTR_s00026p00042160 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | Archaeplastida | |
AT3G04840 | No alias | Ribosomal protein S3Ae | 0.26 | Archaeplastida | |
AT4G34670 | No alias | Ribosomal protein S3Ae | 0.24 | Archaeplastida | |
Cpa|evm.model.tig00020710.39 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.21 | Archaeplastida | |
Cre13.g568650 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.09 | Archaeplastida | |
GSVIVT01018024001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.09 | Archaeplastida | |
GSVIVT01021836001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.19 | Archaeplastida | |
Gb_02289 | No alias | component RPS3a of SSU proteome | 0.12 | Archaeplastida | |
LOC_Os02g18550.1 | No alias | component RPS3a of SSU proteome | 0.08 | Archaeplastida | |
MA_124901g0010 | No alias | component RPS3a of SSU proteome | 0.09 | Archaeplastida | |
MA_31004g0010 | No alias | component RPS3a of SSU proteome | 0.2 | Archaeplastida | |
Mp6g02810.1 | No alias | component RPS3a of SSU proteome | 0.26 | Archaeplastida | |
Pp3c11_17260V3.1 | No alias | Ribosomal protein S3Ae | 0.11 | Archaeplastida | |
Pp3c12_18590V3.1 | No alias | Ribosomal protein S3Ae | 0.03 | Archaeplastida | |
Pp3c18_2090V3.1 | No alias | Ribosomal protein S3Ae | 0.2 | Archaeplastida | |
Pp3c21_21510V3.1 | No alias | Ribosomal protein S3Ae | 0.16 | Archaeplastida | |
Pp3c22_18300V3.1 | No alias | Ribosomal protein S3Ae | 0.09 | Archaeplastida | |
Pp3c4_14160V3.1 | No alias | Ribosomal protein S3Ae | 0.19 | Archaeplastida | |
Smo160008 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | Archaeplastida | |
Smo271906 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | Archaeplastida | |
Smo271907 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | Archaeplastida | |
Solyc03g097900.3.1 | No alias | component RPS3a of SSU proteome | 0.17 | Archaeplastida | |
Solyc06g072490.3.1 | No alias | component RPS3a of SSU proteome | 0.24 | Archaeplastida | |
Solyc09g082520.3.1 | No alias | component RPS3a of SSU proteome | 0.09 | Archaeplastida | |
Zm00001e000767_P001 | No alias | No annotation | 0.17 | Archaeplastida | |
Zm00001e038777_P001 | No alias | component RPS3a of SSU proteome | 0.22 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
MF | GO:0003924 | GTPase activity | IEP | Neighborhood |
MF | GO:0004019 | adenylosuccinate synthase activity | IEP | Neighborhood |
MF | GO:0005525 | GTP binding | IEP | Neighborhood |
BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
BP | GO:0006414 | translational elongation | IEP | Neighborhood |
BP | GO:0006553 | lysine metabolic process | IEP | Neighborhood |
BP | GO:0006694 | steroid biosynthetic process | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Neighborhood |
MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Neighborhood |
BP | GO:0008202 | steroid metabolic process | IEP | Neighborhood |
MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | Neighborhood |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
BP | GO:0009085 | lysine biosynthetic process | IEP | Neighborhood |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Neighborhood |
BP | GO:0016125 | sterol metabolic process | IEP | Neighborhood |
BP | GO:0016126 | sterol biosynthetic process | IEP | Neighborhood |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Neighborhood |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Neighborhood |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032977 | membrane insertase activity | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
BP | GO:0046451 | diaminopimelate metabolic process | IEP | Neighborhood |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Neighborhood |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001593 | Ribosomal_S3Ae | 15 | 221 |
No external refs found! |