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  5. LOC_Os12g21980.1

LOC_Os12g21980.1


Description : no hits & (original description: none)


Gene families : OG0001754 (Archaeplastida) Phylogenetic Tree(s): OG0001754_tree ,
OG_05_0001129 (LandPlants) Phylogenetic Tree(s): OG_05_0001129_tree ,
OG_06_0000591 (SeedPlants) Phylogenetic Tree(s): OG_06_0000591_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g21980.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
ChrSy.fgenesh.mRNA.52 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g31010.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os01g31040.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os03g30030.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g45734.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g56040.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os04g16459.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os05g08660.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g36040.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g27990.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g18640.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g20940.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g16960.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g31860.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g21540.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e041796_P001 No alias No annotation 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 79 167
No external refs found!