1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os12g24080.1

LOC_Os12g24080.1


Description : monomeric E3 ubiquitin ligase (HECT)


Gene families : OG0001713 (Archaeplastida) Phylogenetic Tree(s): OG0001713_tree ,
OG_05_0001924 (LandPlants) Phylogenetic Tree(s): OG_05_0001924_tree ,
OG_06_0002093 (SeedPlants) Phylogenetic Tree(s): OG_06_0002093_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g24080.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00211330 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00061p00204480 No alias Protein degradation.peptide tagging.Ubiquitin... 0.1 Archaeplastida
AT1G55860 UPL1 ubiquitin-protein ligase 1 0.09 Archaeplastida
AT1G70320 UPL2 ubiquitin-protein ligase 2 0.06 Archaeplastida
Cre01.g012450 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01009206001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01009208001 No alias E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01014697001 No alias E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01014698001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_17424 No alias monomeric E3 ubiquitin ligase (HECT) 0.06 Archaeplastida
Gb_26785 No alias monomeric E3 ubiquitin ligase (HECT) 0.02 Archaeplastida
MA_20049g0010 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
MA_20049g0020 No alias E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_7295g0020 No alias E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp4g21620.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
Mp7g16120.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.02 Archaeplastida
Pp3c11_25020V3.1 No alias ubiquitin-protein ligase 1 0.06 Archaeplastida
Pp3c7_8070V3.1 No alias ubiquitin-protein ligase 1 0.05 Archaeplastida
Pp3c7_8076V3.1 No alias ubiquitin-protein ligase 1 0.06 Archaeplastida
Smo154179 No alias Protein degradation.peptide tagging.Ubiquitin... 0.1 Archaeplastida
Solyc04g076620.4.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.05 Archaeplastida
Solyc07g065630.4.1 No alias E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e009321_P001 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
Zm00001e017836_P002 No alias monomeric E3 ubiquitin ligase (HECT) 0.11 Archaeplastida
Zm00001e039654_P001 No alias monomeric E3 ubiquitin ligase (HECT) 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
CC GO:0035658 Mon1-Ccz1 complex IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025527 DUF4414 1 27
IPR000569 HECT_dom 689 999
No external refs found!