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  5. LOC_Os12g28550.1

LOC_Os12g28550.1


Description : AAA-ATPase At5g40000 OS=Arabidopsis thaliana (sp|f4kfx5|aatpj_arath : 337.0)


Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0016234 (LandPlants) Phylogenetic Tree(s): OG_05_0016234_tree ,
OG_06_0014425 (SeedPlants) Phylogenetic Tree(s): OG_06_0014425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g28550.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267180 evm_27.TU.AmTr_v1... AAA-ATPase At3g28540 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00014p00241930 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00019p00244450 evm_27.TU.AmTr_v1... AAA-ATPase At3g28510 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00019p00244740 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00019p00244830 evm_27.TU.AmTr_v1... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00036p00176790 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT2G18193 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT3G28510 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
AT3G28540 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Archaeplastida
AT3G28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Archaeplastida
AT3G50930 BCS1 cytochrome BC1 synthesis 0.03 Archaeplastida
AT5G17730 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
AT5G40000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Archaeplastida
AT5G40010 AATP1 AAA-ATPase 1 0.05 Archaeplastida
GSVIVT01008088001 No alias AAA-ATPase At3g28540 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01010368001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01018890001 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01023336001 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01029545001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032552001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01032553001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01032554001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01032556001 No alias No description available 0.04 Archaeplastida
Gb_16063 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_27546 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g42030.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g45450.1 No alias AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os03g02330.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g38800.1 No alias AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os06g48250.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g24320.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os12g28137.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g28177.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g28590.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10285593g0010 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10435468g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_216982g0010 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_230170g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_23842g0010 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_344969g0010 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_354707g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_56516g0010 No alias AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis... 0.04 Archaeplastida
Pp3c12_21960V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Pp3c1_22130V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Solyc02g062550.3.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc02g087540.3.1 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g033790.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g033840.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g007280.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc12g055810.1.1 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e003357_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e003358_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e004348_P001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e011416_P001 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e012527_P001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e013138_P001 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e027961_P001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e038158_P001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 214 357
IPR025753 AAA_N_dom 31 91
No external refs found!