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  5. LOC_Os12g28740.1

LOC_Os12g28740.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g28740.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g03590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g18200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g19960.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g20190.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os01g21490.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g24510.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g24530.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g29710.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g33630.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g36766.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g38810.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g08280.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g24310.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g25370.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os02g25520.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g25560.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g56780.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g30080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g54020.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g10020.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g19000.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g23250.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g23280.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g25590.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g26410.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g40240.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g43590.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g14000.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g16580.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g18990.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g19700.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g26100.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g27034.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g27130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g27860.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g50880.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g16900.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g19310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g21150.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os06g30570.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g35350.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g42580.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g03440.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g15800.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os07g17510.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g17540.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g31900.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g34200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g46120.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g03730.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g10230.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g11300.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g12280.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g16080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g17120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g26280.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g01900.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g09420.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g13560.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g13900.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g14260.1 No alias Glutathione S-transferase T3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g15610.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g16890.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g20130.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g20450.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g25240.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g07554.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g07562.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g08650.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g29010.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g33480.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g14350.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g19550.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g24870.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g31180.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g35762.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g43430.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g44100.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g01640.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g11600.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g13080.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g14200.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g14820.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g25300.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g33060.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
LOC_Os12g36480.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g37240.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 889 1001
No external refs found!