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  5. LOC_Os12g29400.1

LOC_Os12g29400.1


Description : GEM-like protein 5 OS=Arabidopsis thaliana (sp|q9lyv6|geml5_arath : 265.0)


Gene families : OG0000398 (Archaeplastida) Phylogenetic Tree(s): OG0000398_tree ,
OG_05_0000750 (LandPlants) Phylogenetic Tree(s): OG_05_0000750_tree ,
OG_06_0006147 (SeedPlants) Phylogenetic Tree(s): OG_06_0006147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g29400.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00120390 evm_27.TU.AmTr_v1... GEM-like protein 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT4G01600 No alias GRAM domain family protein 0.04 Archaeplastida
AT5G08350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.06 Archaeplastida
AT5G23350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.05 Archaeplastida
AT5G23360 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.06 Archaeplastida
GSVIVT01034391001 No alias No description available 0.01 Archaeplastida
GSVIVT01034399001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01034412001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_22682 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g52670.1 No alias GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os04g44500.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os09g29120.1 No alias GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_10147276g0010 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_2965641g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g078510.3.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g011580.2.1 No alias Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Solyc11g011600.3.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Zm00001e012085_P001 No alias GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e015212_P001 No alias GEM-like protein 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e023068_P001 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e039556_P001 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e041280_P002 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004182 GRAM 162 276
No external refs found!