LOC_Os12g29710.1

Description : Disease resistance protein RGA2 OS=Solanum bulbocastanum (sp|q7xbq9|rga2_solbu : 288.0)

Gene families : OG0014852 (Archaeplastida) Phylogenetic Tree(s): OG0014852_tree ,
OG_05_0014533 (LandPlants) Phylogenetic Tree(s): OG_05_0014533_tree ,
OG_06_0014424 (SeedPlants) Phylogenetic Tree(s): OG_06_0014424_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g29710.1
Cluster	HCCA: Cluster_302

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os06g49360.1	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.06	Archaeplastida
LOC_Os11g15700.1	No alias	Disease resistance protein RGA2 OS=Solanum bulbocastanum...	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	270	496

External Links

No external refs found!