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  5. LOC_Os12g32820.1

LOC_Os12g32820.1


Description : subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0082336 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0071243 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g32820.1
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00225530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00122p00120860 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo115821 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Smo118688 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo99541 No alias Solute transport.primary active transport.ABC... 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013581 PDR_assoc 478 534
IPR013525 ABC_2_trans 263 473
IPR003439 ABC_transporter-like 607 692
No external refs found!