Description : component mtRPS12 of small ribosomal subunit proteome
Gene families : OG0008675 (Archaeplastida) Phylogenetic Tree(s): OG0008675_tree ,
OG_05_0010189 (LandPlants) Phylogenetic Tree(s): OG_05_0010189_tree ,
OG_06_0010242 (SeedPlants) Phylogenetic Tree(s): OG_06_0010242_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os12g34062.1 | |
Cluster | HCCA: Cluster_4 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G07675 | No alias | Ribosomal protein S12/S23 family protein | 0.05 | Archaeplastida | |
ATCG00905 | RPS12, RPS12C | ribosomal protein S12C | 0.06 | Archaeplastida | |
ATCG01230 | RPS12B, RPS12 | ribosomal protein S12B | 0.06 | Archaeplastida | |
ATMG00980 | RPSL2 | Ribosomal protein S12/S23 family protein | 0.05 | Archaeplastida | |
Gb_15254 | No alias | Ribosomal protein S7, mitochondrial OS=Triticum aestivum... | 0.06 | Archaeplastida | |
Gb_26488 | No alias | component mtRPS12 of small ribosomal subunit proteome | 0.03 | Archaeplastida | |
Mp6g00030.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
MF | GO:0003954 | NADH dehydrogenase activity | IEP | Neighborhood |
CC | GO:0005739 | mitochondrion | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Neighborhood |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Neighborhood |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Neighborhood |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Neighborhood |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Neighborhood |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
BP | GO:1902600 | proton transmembrane transport | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006032 | Ribosomal_S12/S23 | 12 | 123 |
No external refs found! |