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  5. LOC_Os12g35580.1

LOC_Os12g35580.1


Description : riboflavin synthase (RibC)


Gene families : OG0006247 (Archaeplastida) Phylogenetic Tree(s): OG0006247_tree ,
OG_05_0007600 (LandPlants) Phylogenetic Tree(s): OG_05_0007600_tree ,
OG_06_0008929 (SeedPlants) Phylogenetic Tree(s): OG_06_0008929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g35580.1
Cluster HCCA: Cluster_351

Target Alias Description ECC score Gene Family Method Actions
Cre06.g296600 No alias Coenzyme metabolism.FMN/FAD biosynthesis.riboflavin... 0.03 Archaeplastida
Pp3c2_19260V3.1 No alias lumazine-binding family protein 0.02 Archaeplastida
Solyc07g054190.4.1 No alias riboflavin synthase (RibC) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
InterPro domains Description Start Stop
IPR026017 Lumazine-bd_dom 85 180
IPR026017 Lumazine-bd_dom 193 279
No external refs found!