LOC_Os12g37570.1

Description : protein kinase (MAP3K-RAF)

Gene families : OG0000195 (Archaeplastida) Phylogenetic Tree(s): OG0000195_tree ,
OG_05_0001575 (LandPlants) Phylogenetic Tree(s): OG_05_0001575_tree ,
OG_06_0001329 (SeedPlants) Phylogenetic Tree(s): OG_06_0001329_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g37570.1
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00023800	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.TKL kinase...	0.03	Archaeplastida
AT1G18160	No alias	Protein kinase superfamily protein	0.03	Archaeplastida
AT1G67890	No alias	PAS domain-containing protein tyrosine kinase family protein	0.07	Archaeplastida
AT3G06620	No alias	PAS domain-containing protein tyrosine kinase family protein	0.06	Archaeplastida
AT5G11850	No alias	Protein kinase superfamily protein	0.05	Archaeplastida
AT5G49470	No alias	PAS domain-containing protein tyrosine kinase family protein	0.02	Archaeplastida
Cpa\|evm.model.tig00000319.20	No alias	RNA processing.RNA splicing.U2-type-intron-specific...	0.03	Archaeplastida
Cpa\|evm.model.tig00000383.93	No alias	Enzyme classification.EC_2 transferases.EC_2.7...	0.01	Archaeplastida
GSVIVT01008413001	No alias	Protein modification.phosphorylation.TKL kinase...	0.04	Archaeplastida
Gb_38813	No alias	protein kinase (MAP3K-RAF)	0.03	Archaeplastida
LOC_Os02g50970.1	No alias	protein kinase (MAP3K-RAF)	0.03	Archaeplastida
LOC_Os03g06410.1	No alias	protein kinase (MAP3K-RAF)	0.03	Archaeplastida
Mp8g15630.1	No alias	protein kinase (MAP3K-RAF)	0.02	Archaeplastida
Solyc01g097980.3.1	No alias	protein kinase (MAP3K-RAF)	0.03	Archaeplastida
Zm00001e002883_P001	No alias	protein kinase (MAP3K-RAF)	0.04	Archaeplastida
Zm00001e009483_P001	No alias	protein kinase (CTR1). protein kinase (MAP3K-RAF)	0.03	Archaeplastida
Zm00001e015802_P001	No alias	protein kinase (MAP3K-RAF)	0.04	Archaeplastida
Zm00001e018207_P001	No alias	protein kinase (MAP3K-RAF)	0.03	Archaeplastida
Zm00001e036092_P001	No alias	protein kinase (MAP3K-RAF)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0003690	double-stranded DNA binding	IEP	Neighborhood
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0004559	alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
BP	GO:0008033	tRNA processing	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0015923	mannosidase activity	IEP	Neighborhood
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0017150	tRNA dihydrouridine synthase activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
CC	GO:0044430	cytoskeletal part	IEP	Neighborhood
CC	GO:0071203	WASH complex	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013767	PAS_fold	107	216
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	479	730

External Links

No external refs found!

LOC_Os12g37570.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation