AMTR_s00012p00193110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.125

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS24 component


Gene families : OG0002123 (Archaeplastida) Phylogenetic Tree(s): OG0002123_tree ,
OG_05_0001922 (LandPlants) Phylogenetic Tree(s): OG_05_0001922_tree ,
OG_06_0002453 (SeedPlants) Phylogenetic Tree(s): OG_06_0002453_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00193110
Cluster HCCA: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
AT3G04920 No alias Ribosomal protein S24e family protein 0.04 Archaeplastida
Cpa|evm.model.tig00000361.64 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
Gb_38272 No alias component RPS24 of SSU proteome 0.03 Archaeplastida
LOC_Os01g52490.1 No alias component RPS24 of SSU proteome 0.03 Archaeplastida
MA_119841g0010 No alias component RPS24 of SSU proteome 0.03 Archaeplastida
Smo271584 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
Solyc06g084230.3.1 No alias component RPS24 of SSU proteome 0.03 Archaeplastida
Solyc09g065330.3.1 No alias component RPS24 of SSU proteome 0.04 Archaeplastida
Zm00001e028203_P001 No alias component RPS24 of SSU proteome 0.03 Archaeplastida
Zm00001e030668_P001 No alias component RPS24 of SSU proteome 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
MF GO:0004140 dephospho-CoA kinase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
BP GO:0006450 regulation of translational fidelity IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0015937 coenzyme A biosynthetic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
InterPro domains Description Start Stop
IPR001976 Ribosomal_S24e 25 107
No external refs found!