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  5. AMTR_s00012p00195530

AMTR_s00012p00195530 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.127

Description : External stimuli response.salinity.SOS (Salt Overly Sensitive) signalling pathway.SOS5 component


Gene families : OG0000381 (Archaeplastida) Phylogenetic Tree(s): OG0000381_tree ,
OG_05_0000190 (LandPlants) Phylogenetic Tree(s): OG_05_0000190_tree ,
OG_06_0002391 (SeedPlants) Phylogenetic Tree(s): OG_06_0002391_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00195530
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00195790 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AT2G45470 AGP8, FLA8 FASCICLIN-like arabinogalactan protein 8 0.05 Archaeplastida
AT4G31370 FLA5 FASCICLIN-like arabinogalactan protein 5 precursor 0.02 Archaeplastida
AT5G55730 FLA1 FASCICLIN-like arabinogalactan 1 0.03 Archaeplastida
GSVIVT01014684001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
LOC_Os01g62380.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.03 Archaeplastida
LOC_Os03g03600.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os04g21570.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os06g44660.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os08g23180.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os08g38270.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os09g07350.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
MA_10433947g0010 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
MA_16264g0020 No alias fasciclin-type arabinogalactan protein. regulatory... 0.03 Archaeplastida
MA_55418g0010 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Mp4g14280.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g05430.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g05440.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g05450.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Pp3c26_5590V3.1 No alias Fasciclin-like arabinogalactan family protein 0.03 Archaeplastida
Pp3c4_16840V3.1 No alias FASCICLIN-like arabinogalactan protein 8 0.02 Archaeplastida
Solyc06g076120.2.1 No alias Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis... 0.02 Archaeplastida
Solyc08g006290.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019325_P001 No alias fasciclin-type arabinogalactan protein. regulatory... 0.02 Archaeplastida
Zm00001e024334_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e031831_P001 No alias fasciclin-type arabinogalactan protein. regulatory... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 3 129
No external refs found!