LOC_Os12g39090.2

Description : component ADA1 of SAGA transcription co-activator complex

Gene families : OG0001266 (Archaeplastida) Phylogenetic Tree(s): OG0001266_tree ,
OG_05_0000955 (LandPlants) Phylogenetic Tree(s): OG_05_0000955_tree ,
OG_06_0003891 (SeedPlants) Phylogenetic Tree(s): OG_06_0003891_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g39090.2
Cluster	HCCA: Cluster_282

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000704.27	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.01	Archaeplastida
LOC_Os04g56300.1	No alias	component ADA1 of SAGA transcription co-activator complex	0.05	Archaeplastida
Mp5g08050.1	No alias	component ADA1 of SAGA transcription co-activator complex	0.02	Archaeplastida
Pp3c3_34380V3.1	No alias	No annotation	0.02	Archaeplastida
Solyc03g117820.1.1	No alias	component ADA1 of SAGA transcription co-activator complex	0.03	Archaeplastida
Solyc06g068610.3.1	No alias	component ADA1 of SAGA transcription co-activator complex	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031248	protein acetyltransferase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044451	nucleoplasm part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0070461	SAGA-type complex	IEA	Interproscan
CC	GO:1902493	acetyltransferase complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006914	autophagy	IEP	Neighborhood
MF	GO:0008565	protein transporter activity	IEP	Neighborhood
BP	GO:0016579	protein deubiquitination	IEP	Neighborhood
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Neighborhood
MF	GO:0032977	membrane insertase activity	IEP	Neighborhood
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEP	Neighborhood
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Neighborhood
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
MF	GO:0101005	ubiquitinyl hydrolase activity	IEP	Neighborhood
CC	GO:1902554	serine/threonine protein kinase complex	IEP	Neighborhood
CC	GO:1902911	protein kinase complex	IEP	Neighborhood
CC	GO:1990316	Atg1/ULK1 kinase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR024738	Hfi1/Tada1	10	267

External Links

No external refs found!