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  5. LOC_Os12g39220.1

LOC_Os12g39220.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000387 (SeedPlants) Phylogenetic Tree(s): OG_06_0000387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g39220.1
Cluster HCCA: Cluster_371

Target Alias Description ECC score Gene Family Method Actions
MA_357706g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Pp3c17_17640V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Solyc09g089590.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc10g084910.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e017009_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!