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LOC_Os12g40560.1


Description : Flowering locus K homology domain OS=Arabidopsis thaliana (sp|q9sr13|flk_arath : 325.0)


Gene families : OG0001697 (Archaeplastida) Phylogenetic Tree(s): OG0001697_tree ,
OG_05_0001748 (LandPlants) Phylogenetic Tree(s): OG_05_0001748_tree ,
OG_06_0003559 (SeedPlants) Phylogenetic Tree(s): OG_06_0003559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g40560.1
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00263460 evm_27.TU.AmTr_v1... Flowering locus K homology domain OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_10431753g0010 No alias Flowering locus K homology domain OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g097010.3.1 No alias Flowering locus K homology domain OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e037859_P001 No alias RNA-binding KH domain-containing protein PEPPER... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 209 274
IPR004088 KH_dom_type_1 117 167
IPR004088 KH_dom_type_1 391 452
No external refs found!