LOC_Os12g41060.1

Description : no hits & (original description: none)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0082295 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0071202 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g41060.1
Cluster	HCCA: Cluster_128

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00133970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00006p00266920	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.04	Archaeplastida
AMTR_s00007p00268460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00009p00268560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00010p00194910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00034p00206140	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00039p00088760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00040p00180260	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00040p00196580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00058p00066390	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.04	Archaeplastida
AMTR_s00069p00132820	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.06	Archaeplastida
AMTR_s00077p00141890	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00129p00112550	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G01250	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G04370	ERF14, ATERF14	Ethylene-responsive element binding factor 14	0.05	Archaeplastida
AT1G06160	ORA59	octadecanoid-responsive Arabidopsis AP2/ERF 59	0.04	Archaeplastida
AT1G15360	WIN1, SHN1	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G63030	ddf2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G64380	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G22200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G31230	ATERF15, ERF15	ethylene-responsive element binding factor 15	0.04	Archaeplastida
AT3G23230	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G50260	DEAR1, CEJ1, ATERF#011	cooperatively regulated by ethylene and jasmonate 1	0.03	Archaeplastida
AT3G57600	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT4G16750	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G25490	DREB1B, ATCBF1, CBF1	C-repeat/DRE binding factor 1	0.03	Archaeplastida
AT5G11590	TINY2	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G43410	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
GSVIVT01001089001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01015540001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.03	Archaeplastida
GSVIVT01017542001	No alias	Ethylene-responsive transcription factor ERF084...	0.04	Archaeplastida
GSVIVT01017572001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01021146001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01022076001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01022277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01026334001	No alias	Ethylene-responsive transcription factor ERF003...	0.03	Archaeplastida
GSVIVT01028316001	No alias	No description available	0.03	Archaeplastida
GSVIVT01033793001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01036388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Gb_10809	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Gb_12583	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_17122	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_19118	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_19320	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_41020	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_41433	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_41836	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os01g10370.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os05g49010.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g09790.1	No alias	Ethylene-responsive transcription factor ERF018...	0.03	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
LOC_Os09g11480.2	No alias	Ethylene-responsive transcription factor ERF112...	0.03	Archaeplastida
LOC_Os09g39810.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10430769g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_10431882g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10432141g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_12671g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_2040g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_436575g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_54341g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
MA_5979847g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_65877g0010	No alias	Dehydration-responsive element-binding protein 3...	0.03	Archaeplastida
MA_83118g0010	No alias	transcription factor (DREB)	0.06	Archaeplastida
MA_896002g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_904750g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_9812198g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_99821g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
Mp4g00380.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp5g01050.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Pp3c10_17870V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_3770V3.1	No alias	erf domain protein 9	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.03	Archaeplastida
Pp3c26_14710V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Smo73155	No alias	Ethylene-responsive transcription factor ERF013...	0.02	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc01g009440.3.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc01g091760.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.06	Archaeplastida
Solyc02g067020.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.06	Archaeplastida
Solyc03g007460.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g095977.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc03g117130.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g007170.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g050790.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc05g051180.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g051200.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc09g091950.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc11g011750.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e000611_P001	No alias	Ethylene-responsive transcription factor ERF073...	0.03	Archaeplastida
Zm00001e003579_P001	No alias	Ethylene-responsive transcription factor ERF015...	0.03	Archaeplastida
Zm00001e003858_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e007350_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e014413_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e014415_P001	No alias	transcription factor (DREB)	0.06	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e023157_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e025999_P001	No alias	transcription factor (DREB)	0.06	Archaeplastida
Zm00001e032434_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.03	Archaeplastida
Zm00001e039555_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida
Zm00001e041288_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e041815_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	160	207

External Links

No external refs found!

LOC_Os12g41060.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation