LOC_Os12g41680.1

Description : transcription factor (NAC)

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0004632 (SeedPlants) Phylogenetic Tree(s): OG_06_0004632_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g41680.1
Cluster	HCCA: Cluster_170

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00242720	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00003p00252470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00010p00266320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00018p00070180	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00119p00026870	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00119p00040230	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AT1G12260	EMB2749,...	NAC 007	0.02	Archaeplastida
AT1G52890	ANAC019, NAC019	NAC domain containing protein 19	0.03	Archaeplastida
AT1G62700	VND5, ANAC026	Arabidopsis NAC domain containing protein 26	0.02	Archaeplastida
AT1G71930	ANAC030, VND7	vascular related NAC-domain protein 7	0.02	Archaeplastida
AT2G33480	NAC041, ANAC041	NAC domain containing protein 41	0.02	Archaeplastida
AT3G04060	anac046, NAC046	NAC domain containing protein 46	0.03	Archaeplastida
AT3G04070	anac047, NAC047	NAC domain containing protein 47	0.02	Archaeplastida
AT3G15500	ATNAC3, ANAC055,...	NAC domain containing protein 3	0.02	Archaeplastida
AT3G49530	ANAC062, NAC062, NTL6	NAC domain containing protein 62	0.03	Archaeplastida
AT4G17980	anac071, NAC071	NAC domain containing protein 71	0.02	Archaeplastida
AT4G28530	anac074, NAC074	NAC domain containing protein 74	0.04	Archaeplastida
AT4G36160	VND2, NAC076, ANAC076	NAC domain containing protein 76	0.02	Archaeplastida
AT5G24590	ANAC091, TIP	No description available	0.03	Archaeplastida
AT5G39610	NAC2, ORE1,...	NAC domain containing protein 6	0.03	Archaeplastida
AT5G46590	anac096, NAC096	NAC domain containing protein 96	0.02	Archaeplastida
GSVIVT01023921001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01033032001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01034485001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
Gb_20625	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_22607	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_35048	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_41540	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os01g60020.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os03g60080.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os06g01230.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
LOC_Os11g08210.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_103386g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_10434668g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_10436448g0010	No alias	transcription factor (NAC)	0.05	Archaeplastida
MA_112054g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_183543g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_1948g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_264971g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_33912g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_5115g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_64687g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_86256g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_98483g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
Mp6g02620.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Smo105213	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
Solyc01g009860.3.1	No alias	transcription factor (NAC)	0.08	Archaeplastida
Solyc01g102740.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc03g115850.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc06g060230.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc06g073050.2.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc10g005010.4.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc10g055760.2.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc11g017470.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e006136_P001	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e011786_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e019046_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e024549_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e029404_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e031703_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e033142_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e034111_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e034574_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e035277_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e037804_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e038267_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	15	142

External Links

No external refs found!

LOC_Os12g41680.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation