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  5. LOC_Os12g41900.1

LOC_Os12g41900.1


Description : class III/Trithorax histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0000350 (Archaeplastida) Phylogenetic Tree(s): OG0000350_tree ,
OG_05_0004122 (LandPlants) Phylogenetic Tree(s): OG_05_0004122_tree ,
OG_06_0005195 (SeedPlants) Phylogenetic Tree(s): OG_06_0005195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g41900.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00119370 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
AMTR_s00022p00081590 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
AT1G77300 LAZ2, CCR1,... histone methyltransferases(H3-K4 specific);histone... 0.06 Archaeplastida
AT5G42400 SDG25, ATXR7 SET domain protein 25 0.05 Archaeplastida
Cpa|evm.model.tig00001073.18 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
Cre07.g322450 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
GSVIVT01008805001 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
GSVIVT01023699001 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
GSVIVT01034572001 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
Gb_04139 No alias class III/Trithorax histone methyltransferase component... 0.05 Archaeplastida
Gb_19296 No alias class II/ASH1 histone methyltransferase component of... 0.04 Archaeplastida
MA_18041g0010 No alias class III/Trithorax histone methyltransferase component... 0.03 Archaeplastida
Mp1g17790.1 No alias class III/Trithorax histone methyltransferase component... 0.03 Archaeplastida
Mp8g18560.1 No alias class II/ASH1 histone methyltransferase component of... 0.06 Archaeplastida
Pp3c1_33770V3.1 No alias histone methyltransferases(H3-K4 specific);histone... 0.03 Archaeplastida
Pp3c24_20920V3.1 No alias SET domain protein 25 0.03 Archaeplastida
Pp3c2_12540V3.1 No alias histone methyltransferases(H3-K4 specific);histone... 0.02 Archaeplastida
Pp3c2_35860V3.1 No alias SET domain group 4 0.02 Archaeplastida
Pp3c4_29810V3.1 No alias SET domain group 4 0.03 Archaeplastida
Solyc01g006220.3.1 No alias class II/ASH1 histone methyltransferase component of... 0.04 Archaeplastida
Solyc06g059960.4.1 No alias class II/ASH1 histone methyltransferase component of... 0.03 Archaeplastida
Solyc07g008580.3.1 No alias class II/ASH1 histone methyltransferase component of... 0.02 Archaeplastida
Solyc12g100290.3.1 No alias class II/ASH1 histone methyltransferase component of... 0.04 Archaeplastida
Zm00001e014806_P003 No alias class II/ASH1 histone methyltransferase component of... 0.04 Archaeplastida
Zm00001e022951_P002 No alias class II/ASH1 histone methyltransferase component of... 0.02 Archaeplastida
Zm00001e033782_P001 No alias class II/ASH1 histone methyltransferase component of... 0.02 Archaeplastida
Zm00001e039307_P005 No alias class III/Trithorax histone methyltransferase component... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000776 kinetochore IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016255 attachment of GPI anchor to protein IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034508 centromere complex assembly IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
MF GO:0070403 NAD+ binding IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001214 SET_dom 1085 1189
No external refs found!