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  5. LOC_Os12g41956.1

LOC_Os12g41956.1


Description : hydroxyproline-O-galactosyltransferase (GALT). AGP hydroxyproline O-galactosyltransferase


Gene families : OG0000517 (Archaeplastida) Phylogenetic Tree(s): OG0000517_tree ,
OG_05_0000906 (LandPlants) Phylogenetic Tree(s): OG_05_0000906_tree ,
OG_06_0000771 (SeedPlants) Phylogenetic Tree(s): OG_06_0000771_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g41956.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262720 evm_27.TU.AmTr_v1... Protein modification.N-linked glycosylation.complex... 0.03 Archaeplastida
AT1G74800 No alias Galactosyltransferase family protein 0.02 Archaeplastida
Zm00001e011406_P001 No alias hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002659 Glyco_trans_31 426 607
IPR001079 Galectin_CRD 173 378
No external refs found!