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  5. LOC_Os12g43620.1

LOC_Os12g43620.1


Description : transcription factor (bHLH). bHLH-IVa-class iron homeostasis regulator


Gene families : OG0001334 (Archaeplastida) Phylogenetic Tree(s): OG0001334_tree ,
OG_05_0001220 (LandPlants) Phylogenetic Tree(s): OG_05_0001220_tree ,
OG_06_0071089 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g43620.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT2G22770 NAI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT4G37850 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01003697001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01003701001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.07 Archaeplastida
GSVIVT01004409001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01036959001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.09 Archaeplastida
Gb_10697 No alias transcription factor (bHLH) 0.02 Archaeplastida
Gb_13728 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.02 Archaeplastida
LOC_Os03g46860.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.04 Archaeplastida
MA_50811g0010 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 Archaeplastida
MA_97308g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c11_21970V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Solyc01g106460.4.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 Archaeplastida
Solyc02g091800.4.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 Archaeplastida
Solyc02g091810.2.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.07 Archaeplastida
Solyc05g009640.4.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc06g064580.2.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 Archaeplastida
Zm00001e002570_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e005177_P001 No alias No annotation 0.11 Archaeplastida
Zm00001e005533_P001 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.04 Archaeplastida
Zm00001e012122_P001 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 167 213
No external refs found!