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  5. LOC_Os12g43720.1

LOC_Os12g43720.1


Description : calcium-permeable channel (OSCA)


Gene families : OG0000175 (Archaeplastida) Phylogenetic Tree(s): OG0000175_tree ,
OG_05_0001215 (LandPlants) Phylogenetic Tree(s): OG_05_0001215_tree ,
OG_06_0001435 (SeedPlants) Phylogenetic Tree(s): OG_06_0001435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g43720.1
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009282001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 Archaeplastida
Solyc12g088230.3.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004555 alpha,alpha-trehalase activity IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
MF GO:0015927 trehalase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 186 344
IPR003864 RSN1_7TM 355 621
IPR032880 Csc1_N 6 163
No external refs found!