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  5. AMTR_s00012p00224800

AMTR_s00012p00224800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.174

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0010475 (SeedPlants) Phylogenetic Tree(s): OG_06_0010475_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00224800
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00120860 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AT1G59870 PEN3, ABCG36,... ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Archaeplastida
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.03 Archaeplastida
AT4G15215 ATPDR13, PDR13 pleiotropic drug resistance 13 0.03 Archaeplastida
Cre12.g540650 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01017188001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01036184001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Gb_34645 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os01g08260.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
LOC_Os02g32690.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os11g37700.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
MA_135152g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_17319g0020 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_18770g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp2g07030.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c16_9600V3.1 No alias pleiotropic drug resistance 11 0.02 Archaeplastida
Pp3c5_3240V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.05 Archaeplastida
Smo115821 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo118688 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo267739 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo96729 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Smo99541 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Solyc05g018510.3.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.03 Archaeplastida
Solyc05g055330.3.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc06g065670.4.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.02 Archaeplastida
Solyc06g076930.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e024257_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e026148_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e040575_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
MF GO:0004832 valine-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006438 valyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031167 rRNA methylation IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013581 PDR_assoc 537 593
IPR013525 ABC_2_trans 321 532
IPR013525 ABC_2_trans 858 1045
No external refs found!