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  4. Sequence
  5. Smo100162

Smo100162


Description : Cytoskeleton.microtubular network.alpha-beta-Tubulin heterodimer.alpha-Tubulin component


Gene families : OG0000426 (Archaeplastida) Phylogenetic Tree(s): OG0000426_tree ,
OG_05_0000313 (LandPlants) Phylogenetic Tree(s): OG_05_0000313_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo100162
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00254750 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
AMTR_s00033p00112490 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 Archaeplastida
AMTR_s00068p00090790 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
AT1G04820 TOR2, TUA4 tubulin alpha-4 chain 0.02 Archaeplastida
AT1G50010 TUA2 tubulin alpha-2 chain 0.03 Archaeplastida
AT5G19780 TUA5 tubulin alpha-5 0.03 Archaeplastida
Cpa|evm.model.tig00000237.34 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 Archaeplastida
Cpa|evm.model.tig00000404.34 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
Cre03.g190950 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
Cre04.g216850 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
GSVIVT01025462001 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
GSVIVT01033415001 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
LOC_Os03g11970.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.01 Archaeplastida
LOC_Os03g51600.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
LOC_Os07g38730.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
LOC_Os11g14220.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
MA_184192g0010 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
MA_273360g0010 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Mp1g24530.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Mp2g23500.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Pp3c14_17800V3.1 No alias tubulin alpha-2 chain 0.01 Archaeplastida
Pp3c16_6220V3.1 No alias tubulin alpha-3 0.03 Archaeplastida
Pp3c25_1010V3.1 No alias tubulin alpha-5 0.03 Archaeplastida
Zm00001e005536_P001 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e005537_P001 No alias Tubulin alpha-1 chain OS=Zea mays (sp|p14640|tba1_maize : 353.0) 0.02 Archaeplastida
Zm00001e010608_P001 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e011939_P002 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Zm00001e012118_P001 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Zm00001e035332_P001 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
No external refs found!