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  5. AMTR_s00012p00228710

AMTR_s00012p00228710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.181

Description : Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein OS=Arabidopsis thaliana


Gene families : OG0004751 (Archaeplastida) Phylogenetic Tree(s): OG0004751_tree ,
OG_05_0003275 (LandPlants) Phylogenetic Tree(s): OG_05_0003275_tree ,
OG_06_0002337 (SeedPlants) Phylogenetic Tree(s): OG_06_0002337_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00228710
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT2G07815 No alias BEST Arabidopsis thaliana protein match is: cytochrome C... 0.08 Archaeplastida
ATMG00180 CCB452 cytochrome C biogenesis 452 0.06 Archaeplastida
Gb_01757 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.06 Archaeplastida
Solyc00g052430.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc00g500241.1.1 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.09 Archaeplastida
Zm00001e042200_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.02 Archaeplastida
Zm00001e042201_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.02 Archaeplastida
Zm00001e042313_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.03 Archaeplastida
Zm00001e042314_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.02 Archaeplastida
Zm00001e042392_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.02 Archaeplastida
Zm00001e042398_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.02 Archaeplastida
Zm00001e042422_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.02 Archaeplastida
Zm00001e042430_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0008535 respiratory chain complex IV assembly IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0042773 ATP synthesis coupled electron transport IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!