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  5. Smo100311

Smo100311


Description : Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana


Gene families : OG0000639 (Archaeplastida) Phylogenetic Tree(s): OG0000639_tree ,
OG_05_0000548 (LandPlants) Phylogenetic Tree(s): OG_05_0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo100311
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00115860 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT5G53720 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
LOC_Os06g41790.1 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.04 Archaeplastida
MA_1682g0010 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c10_3350V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
Zm00001e023856_P001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004555 alpha,alpha-trehalase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0015927 trehalase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 26 81
No external refs found!