Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000030 (LandPlants) Phylogenetic Tree(s): OG_05_0000030_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo101 | |
Cluster | HCCA: Cluster_10 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00250660 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | Archaeplastida | |
AMTR_s00019p00110050 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
AMTR_s00170p00032020 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g16860... | 0.02 | Archaeplastida | |
Cre08.g358250 | No alias | Pentatricopeptide repeat-containing protein At5g02860... | 0.02 | Archaeplastida | |
Gb_13599 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | Archaeplastida | |
Gb_33061 | No alias | RNA editing factor (MEF3) | 0.03 | Archaeplastida | |
Gb_34736 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
Gb_36168 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | Archaeplastida | |
LOC_Os05g49740.1 | No alias | Pentatricopeptide repeat-containing protein At5g39680... | 0.02 | Archaeplastida | |
LOC_Os06g08660.1 | No alias | Pentatricopeptide repeat-containing protein At4g30700... | 0.03 | Archaeplastida | |
LOC_Os12g06070.1 | No alias | Pentatricopeptide repeat-containing protein At5g04780,... | 0.02 | Archaeplastida | |
MA_104937g0010 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.02 | Archaeplastida | |
MA_52613g0020 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | Archaeplastida | |
MA_9384g0020 | No alias | Pentatricopeptide repeat-containing protein At3g49170,... | 0.02 | Archaeplastida | |
Smo121365 | No alias | Pentatricopeptide repeat-containing protein At3g02330,... | 0.04 | Archaeplastida | |
Smo133094 | No alias | Pentatricopeptide repeat-containing protein At4g14820... | 0.05 | Archaeplastida | |
Smo20633 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | Archaeplastida | |
Smo42377 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.04 | Archaeplastida | |
Smo428483 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida | |
Smo80412 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | Archaeplastida | |
Smo80739 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | Archaeplastida | |
Smo92565 | No alias | Pentatricopeptide repeat-containing protein At4g14820... | 0.06 | Archaeplastida | |
Zm00001e020567_P001 | No alias | RNA editing factor (MEF7) | 0.03 | Archaeplastida | |
Zm00001e020583_P001 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 640 | 666 |
No external refs found! |