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  4. Sequence
  5. Smo101148

Smo101148


Description : Cell wall.hemicellulose.heteromannan.modification and degradation.endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo101148
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00202020 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
AMTR_s00077p00136900 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
AMTR_s00099p00070100 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01018923001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
GSVIVT01030165001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
GSVIVT01037212001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
GSVIVT01037214001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.05 Archaeplastida
GSVIVT01037215001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
Gb_04261 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Gb_08848 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Gb_28909 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Gb_29706 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Gb_30579 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Gb_31304 No alias Mannan endo-1,4-beta-mannosidase 3 OS=Oryza sativa... 0.03 Archaeplastida
Gb_33018 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
LOC_Os01g47400.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
LOC_Os01g54300.1 No alias endo-beta-1,4-mannanase 0.01 Archaeplastida
LOC_Os05g25480.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_10358593g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10432193g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_10433157g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10436185g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.03 Archaeplastida
MA_111906g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_38956g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_6558g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_69814g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_71720g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_8194133g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.05 Archaeplastida
MA_894609g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_953274g0010 No alias No annotation 0.02 Archaeplastida
Mp8g13360.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Mp8g13380.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Pp3c13_12000V3.1 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
Pp3c2_29970V3.1 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
Pp3c5_23790V3.1 No alias Glycosyl hydrolase superfamily protein 0.05 Archaeplastida
Smo234867 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
Solyc01g008720.2.1 No alias endo-beta-1,4-mannanase 0.06 Archaeplastida
Solyc04g080620.3.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Solyc07g053920.3.1 No alias endo-beta-1,4-mannanase 0.06 Archaeplastida
Solyc10g074920.2.1 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Zm00001e019799_P001 No alias No annotation 0.02 Archaeplastida
Zm00001e020240_P001 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 29 315
No external refs found!