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  5. AMTR_s00012p00235880

AMTR_s00012p00235880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.196

Description : TATA-binding protein-associated factor BTAF1 OS=Arabidopsis thaliana


Gene families : OG0003426 (Archaeplastida) Phylogenetic Tree(s): OG0003426_tree ,
OG_05_0005328 (LandPlants) Phylogenetic Tree(s): OG_05_0005328_tree ,
OG_06_0005406 (SeedPlants) Phylogenetic Tree(s): OG_06_0005406_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00235880
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT3G54280 BTAF1, RGD3,... DNA binding;ATP binding;nucleic acid... 0.07 Archaeplastida
GSVIVT01019359001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
Gb_19667 No alias chromatin remodeling factor (Mot1). TATA box-binding... 0.03 Archaeplastida
MA_10431148g0010 No alias TATA-binding protein-associated factor BTAF1... 0.03 Archaeplastida
MA_79681g0010 No alias chromatin remodeling factor (Mot1). TATA box-binding... 0.02 Archaeplastida
Mp6g18490.1 No alias chromatin remodeling factor (Mot1). TATA box-binding... 0.03 Archaeplastida
Pp3c3_11220V3.1 No alias DNA binding;ATP binding;nucleic acid... 0.02 Archaeplastida
Smo186944 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Solyc08g074500.2.1 No alias chromatin remodeling factor (Mot1). TATA box-binding... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
InterPro domains Description Start Stop
IPR022707 DUF3535 246 402
IPR022707 DUF3535 400 488
No external refs found!