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Description : Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo102603 | |
| Cluster | HCCA: Cluster_15 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00078p00067180 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g46050,... | 0.02 | Archaeplastida | |
| AMTR_s00439p00011030 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g04780,... | 0.02 | Archaeplastida | |
| AT3G23330 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
| AT3G47840 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
| AT4G31070 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | Archaeplastida | |
| GSVIVT01035920001 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.01 | Archaeplastida | |
| LOC_Os07g20420.1 | No alias | Pentatricopeptide repeat-containing protein At3g26782,... | 0.02 | Archaeplastida | |
| LOC_Os11g01836.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
| MA_83898g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.01 | Archaeplastida | |
| Smo137234 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | Archaeplastida | |
| Smo428483 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.01 | Archaeplastida | |
| Smo78092 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | Archaeplastida | |
| Zm00001e003562_P001 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.01 | Archaeplastida | |
| Zm00001e006544_P001 | No alias | No annotation | 0.02 | Archaeplastida | |
| Zm00001e008200_P001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.01 | Archaeplastida | |
| Zm00001e015358_P001 | No alias | Pentatricopeptide repeat-containing protein At5g39350... | 0.01 | Archaeplastida | |
| Zm00001e021453_P001 | No alias | Pentatricopeptide repeat-containing protein At5g06540... | 0.01 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003747 | translation release factor activity | IEP | Neighborhood |
| BP | GO:0006282 | regulation of DNA repair | IEP | Neighborhood |
| MF | GO:0008079 | translation termination factor activity | IEP | Neighborhood |
| BP | GO:0048583 | regulation of response to stimulus | IEP | Neighborhood |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | Neighborhood |
| BP | GO:0080134 | regulation of response to stress | IEP | Neighborhood |
| BP | GO:0080135 | regulation of cellular response to stress | IEP | Neighborhood |
| BP | GO:2001020 | regulation of response to DNA damage stimulus | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 319 | 347 |
| No external refs found! |