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  5. Smo103279

Smo103279


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycosylation.EXT beta-1,2-arabinosyltransferase


Gene families : OG0002390 (Archaeplastida) Phylogenetic Tree(s): OG0002390_tree ,
OG_05_0003815 (LandPlants) Phylogenetic Tree(s): OG_05_0003815_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo103279
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G75120 RRA1 Nucleotide-diphospho-sugar transferase family protein 0.03 Archaeplastida
Cre02.g111000 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
Cre06.g288500 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 Archaeplastida
Cre11.g480851 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.01 Archaeplastida
GSVIVT01009666001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
Solyc04g080080.3.1 No alias arabinosyltransferase (RRA). extensin... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005069 Nucl-diP-sugar_transferase 187 407
No external refs found!