Smo103537


No description available


Gene families : OG0005448 (Archaeplastida) Phylogenetic Tree(s): OG0005448_tree ,
OG_05_0006794 (LandPlants) Phylogenetic Tree(s): OG_05_0006794_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo103537
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AT1G54770 No alias Fcf2 pre-rRNA processing protein 0.03 Archaeplastida
AT5G30495 No alias Fcf2 pre-rRNA processing protein 0.02 Archaeplastida
Cpa|evm.model.tig00021612.48 No alias No description available 0.03 Archaeplastida
GSVIVT01017685001 No alias No description available 0.03 Archaeplastida
LOC_Os02g49780.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c7_450V3.1 No alias Fcf2 pre-rRNA processing protein 0.02 Archaeplastida
Solyc05g053220.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003951 NAD+ kinase activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0030688 preribosome, small subunit precursor IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046834 lipid phosphorylation IEP Neighborhood
BP GO:0046854 phosphatidylinositol phosphorylation IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR014810 Fcf2 82 174
No external refs found!